DE-kupl

Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition

What's new?

New release of DE-kupl: 1.0


The new version of DE-kupl now includes a higly sensitive differential procedure based of DESeq2.

The bioRxiv preprint has also been udated with a detailed description of this new procedure as well as a cross-validationg test of DE-kupl using idenpendant datasets from GTEx and HPA (Human Protein Atlas) RNA-Seq data.


DE-kupl publication released on BioArxiv


The first version of DE-kupl publication has been released as a pre-print on bioRxiv.

Some reactions about the article on twitter.


subscribe via RSS

Contact us

Any question regarding the software? Open an issue to our Github project.

Publications

Jérôme Audoux, Nicolas Philippe, Rayan Chikhi, Mikaël Salson, Marc Gabriel, Thérèse Commes, Daniel Gautheret. Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition doi: https://doi.org/10.1101/122937